"Decipher cytochrome P450 enzymes (CYPs) by digital tools to produce flavonoids and terpenoids" (deCYPher) is a €6 million Horizon Europe Research and Innovation Actions (RIA) project, coordinated by Ghent University. deCYPher aims to develop a standardised platform to implement artificial intelligence and machine learning techniques to overcome current hurdles in industrial biotechnology and unlock the full potential in biotech engineering.
The Research Foundation Flanders (FWO) awarded the ELIXIR Belgium consortium a 4-year grant of 7.8M€ to continue to operate the Belgian ELIXIR Node, providing services to life science researchers. This infrastructure funding allows the partners to expand and improve our portfolio of services.
On 3 - 4 May 2023, the Antwerp Unit for Data Analysis and Computation in Immunology and Sequencing (AUDACIS) will organize ATCR23: The third Antwerp T-cell receptors (TCR) meeting where international experts will come together to present and discuss a broad array of research relevant to the topic.
A list of presentation topics can be found in the programme here
This workshop will take you through the basic use of Git and GitHub. Git is a free and open source distributed version-control system designed to maintain code, track changes, recover old versions and collaborate with other developers.
You will learn how to use Nextflow for building scalable and reproducible bioinformatics pipelines and running them on a personal computer, cluster and cloud. Starting from the basic concepts we will build our own simple pipeline and add new features with every step, all in the new DSL2 language.
Objectives
The course will give an introduction to containers (Docker & Singularity) which are great components to achieve portability and reproducibility of your analysis. You will learn how to use containers and how to build a container from scratch, share it with others and how to re-use and modify existing containers. After an extensive explanation on Docker containers, Singularity will be highlighted as well.
iRefIndex is a resource based on peptide sequence matching, providing an index of protein interactions available in a number of primary interaction databases (including BIND, BAR, BioGRID, CORUM, DIP, InnateDB, IntAct, HPRD, HuRi, MATRIXDB, MPACT, MPPI and MPIDB, REACTOME, VIRUSHOST, UNIPROTPP, HPIDB, BHF-UCL, and QuickGO).