TCRex allows functional interpretation of full human T-cell repertoire data derived from next generation sequencing. The tool is able to link T-cell receptor sequences to a rapidly expanding list of important immunogenic epitopes, consisting of viral and cancer epitopes. TCRex can calculate enrichment statistics and baseline prediction rates to evaluate full repertoires.
Tabloid Proteome is a database of protein association networks generated using publically available mass spectrometry based experiments in PRIDE. These associations represent a broad scala of biological associations between pairs of proteins that goes well beyond mere binary protein interactions.
Scop3P provides a unique and powerful resource to explore and understand the impact of phospho-sites on human protein structure and function, and can thus serve as a springboard for researchers seeking to analyse and interpret a given phosphosite or phosphoprotein in a structural, biophysical, and biological context.
RDM Guide is an information resource on research data management for life sciences, developed and curated by ELIXIR Belgium since 2020. RDM Guide is tailored to Belgian researchers and describes national data management guidelines, resources, tools and services.
PLAZA is a plant-oriented online resource for comparative, evolutionary and functional genomics. It allows querying and visualising structural and functional annotations, gene families, protein domains, phylogenetic trees, and genome organization.
PIPPA is a central web interface and database that provides the tools for the management of different types of plant phenotyping robots and for the analysis of images and data.
ORCAE is a wiki style genome annotation and curation portal for eukaryotic species which offers the community the opportunity and means to improve genome annotations and to keep gene annotations up-to-date.
The MS2PIP Server is a tool to accurately predict peptide fragment ion intensities for mass spectrometry-based proteomics data. It employs the XGBoost machine learning algorithm and is accessible through a RESTful API.
The Federated MSDA Infrastructure is a combination of software, data science pipelines and hardware aiming to support and speed-up large-scale collaborative real-world Multiple Sclerosis (MS) data efforts. It allows to collect and share patient and aggregated data, and to perform data quality assessment, error detection and analyses in a secure GDPR compliant private research environment.
OLIDA (Oligogenic Diseases Database), is a curated database of oligogenic diseases and the variants in genes that have been published as causing these diseases.