Jan
17
January 17, 2022, 9:30 am
January 18, 2022, 5:00 pm

You will learn how to use Nextflow for building scalable and reproducible bioinformatics pipelines and running them on a personal computer, cluster and cloud. Starting from the basic concepts we will build our own simple pipeline and add new features with every step, all in the new DSL2 language.

Objectives

  • Understand Nextflow's basic concepts: channels, processes, modules, workflows, etc. 
  • Write and run a Nextflow pipeline 
  • Write and modify config files for storing parameters related to computing hardware as well as pipeline dependent parameters

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